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Sample GSM1727596 Query DataSets for GSM1727596
Status Public on Mar 08, 2016
Title RMC_INI141
Sample type RNA
 
Source name Renal Medullary Carcinoma
Organism Homo sapiens
Characteristics tissue: MRC
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Jun 30, 2015
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE70421 SMARCB1-deficient rhaboid tumors of the kidney and renal medullary carcinomas.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 3.972557494
10_at 2.060907136
100_at 5.140506945
1000_at 4.191155703
10000_at 3.332267477
100009676_at 2.065974583
10001_at 7.720587624
10002_at 2.41949772
10003_at 2.637361014
10004_at 2.211789013
100048912_at 2.1584595
100049716_at 3.581364288
10005_at 5.423200172
10006_at 10.14848884
10007_at 10.11488575
10008_at 2.921832231
10009_at 7.604556039
100093630_at 12.68834843
1001_at 2.341781638
10010_at 8.213631142

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1727596_MM34_ARN0011_s1h1_U133p2.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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