|
| Status |
Public on Jul 09, 2015 |
| Title |
TD control (Sample_11) |
| Sample type |
genomic |
| |
|
| Source name |
whole blood
|
| Organism |
Homo sapiens |
| Characteristics |
group: TD control
tissue: whole blood
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from freshly drawn blood samples using either 5 prime DNA extraction, AllPrep DNA/RNA mini kit or QIAamp DNA blood mini kit using standard protocols
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Standard Illumina protocol
|
| |
|
| Hybridization protocol |
Sandard Illumina protocol using bisulfite converted genomic DNA
|
| Scan protocol |
Standard protocol using the Illumina iScan SQ scanner
|
| Description |
blood sample from typically developing child
genomic DNA from whole blood sample
|
| Data processing |
Image files were pre-processed using GenomeStudio (v2011.1) methylation module (v1.9.0) using background correction and Illumina normalization
|
| |
|
| Submission date |
Mar 05, 2015 |
| Last update date |
Jul 09, 2015 |
| Contact name |
Lucy Osborne |
| E-mail(s) |
lucy.osborne@utoronto.ca
|
| Organization name |
University of Toronto
|
| Department |
Medicine
|
| Lab |
Osborne
|
| Street address |
7360 Medical Sciences Building, 1 Kings College Circle
|
| City |
Toronto |
| State/province |
ON |
| ZIP/Postal code |
M5S1A8 |
| Country |
Canada |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE66552 |
Symmetrical dose-dependent DNA methylation profiles in children with deletion or duplication of chromosome 7q11.23 |
|
