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GEO accession:
Sample GSM161262
Query DataSets for GSM161262
Status
Public on Feb 08, 2008
Title
Head_group_housing_6day_male_3_3
Sample type
RNA
Source name
Head_group_housing_6day_male_3_3
Organism
Drosophila melanogaster
Characteristics
head from 6-day-old group-housed male Canton-S
Treatment protocol
new eclosion males were housed at 10 flies/vial in vials for 6 days
Extracted molecule
total RNA
Extraction protocol
TriZol
Label
Biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
20 group-housed males were frozen in liquid nitrogen between 5pm-6pm. Heads were separated and used for RNA extraction.
Data processing
Rosetta Resolver Platform
Submission date
Feb 09, 2007
Last update date
Aug 28, 2018
Contact name
Liming Wang
E-mail(s)
lmwang@caltech.edu
Phone
626-395-6822
Organization name
California Institute of Technology
Department
216-76， Division of Biology
Lab
David J Anderson
Street address
1200 E. California Bl.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1322
Series (1)
GSE6994
Comparative gene expression profiling of group-housed, less aggressive vs. single-housed, more aggressive male flies
Relations
Reanalyzed by
GSE119084
Data table header descriptions
ID_REF
VALUE
a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION-P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION-P-VALUE
AFFX-BioB-5_at
196.711
P
5.16732e-05
AFFX-BioB-M_at
220.765
P
7.00668e-05
AFFX-BioB-3_at
145.823
P
7.00668e-05
AFFX-BioC-5_at
409.97
P
6.02111e-05
AFFX-BioC-3_at
414.489
P
5.16732e-05
AFFX-BioDn-5_at
1038.36
P
4.42873e-05
AFFX-BioDn-3_at
1885.62
P
5.16732e-05
AFFX-CreX-5_at
5758.74
P
5.16732e-05
AFFX-CreX-3_at
6991.26
P
4.42873e-05
AFFX-DapX-5_at
72.8967
P
6.02111e-05
AFFX-DapX-M_at
159.913
P
0.000753643
AFFX-DapX-3_at
249.216
P
6.02111e-05
AFFX-LysX-5_at
13.0359
P
0.00227496
AFFX-LysX-M_at
32.4893
A
0.262827
AFFX-LysX-3_at
62.3369
P
0.000126798
AFFX-PheX-5_at
15.6357
P
0.00762003
AFFX-PheX-M_at
28.3034
M
0.050229
AFFX-PheX-3_at
37.8777
P
0.00255552
AFFX-ThrX-5_at
25.9414
P
0.00933744
AFFX-ThrX-M_at
40.9081
P
0.000445439
Total number of rows:
18952
Table truncated, full table size
583 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM161262.CEL.gz
1.9 Mb
(ftp)
(http)
CEL
GSM161262.CHP.gz
106.1 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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