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GEO accession:
Sample GSM161260
Query DataSets for GSM161260
Status
Public on Feb 08, 2008
Title
Head_group_housing_6day_male_3_2
Sample type
RNA
Source name
Head_group_housing_6day_male_3_2
Organism
Drosophila melanogaster
Characteristics
head from 6-day-old group-housed male Canton-S
Treatment protocol
new eclosion males were housed at 10 flies/vial in vials for 6 days
Extracted molecule
total RNA
Extraction protocol
TriZol
Label
Biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
20 group-housed males were frozen in liquid nitrogen between 5pm-6pm. Heads were separated and used for RNA extraction.
Data processing
Rosetta Resolver Platform
Submission date
Feb 09, 2007
Last update date
Aug 28, 2018
Contact name
Liming Wang
E-mail(s)
lmwang@caltech.edu
Phone
626-395-6822
Organization name
California Institute of Technology
Department
216-76， Division of Biology
Lab
David J Anderson
Street address
1200 E. California Bl.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1322
Series (1)
GSE6994
Comparative gene expression profiling of group-housed, less aggressive vs. single-housed, more aggressive male flies
Relations
Reanalyzed by
GSE119084
Data table header descriptions
ID_REF
VALUE
a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION-P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION-P-VALUE
AFFX-BioB-5_at
158.593
P
6.02111e-05
AFFX-BioB-M_at
199.883
P
5.16732e-05
AFFX-BioB-3_at
109.949
P
9.4506e-05
AFFX-BioC-5_at
306.216
P
5.16732e-05
AFFX-BioC-3_at
341.138
P
4.42873e-05
AFFX-BioDn-5_at
774.854
P
4.42873e-05
AFFX-BioDn-3_at
1611.87
P
5.16732e-05
AFFX-CreX-5_at
4503.96
P
5.16732e-05
AFFX-CreX-3_at
5491.52
P
4.42873e-05
AFFX-DapX-5_at
52.1747
P
9.4506e-05
AFFX-DapX-M_at
108.043
P
0.000753643
AFFX-DapX-3_at
221.755
P
4.42873e-05
AFFX-LysX-5_at
12.27
P
0.0200219
AFFX-LysX-M_at
29.6517
A
0.15671
AFFX-LysX-3_at
63.3191
P
0.000195116
AFFX-PheX-5_at
21.5791
P
0.00159257
AFFX-PheX-M_at
21.5251
A
0.108979
AFFX-PheX-3_at
31.2533
P
0.00227496
AFFX-ThrX-5_at
13.0867
P
0.00556451
AFFX-ThrX-M_at
34.6093
P
0.000445439
Total number of rows:
18952
Table truncated, full table size
582 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM161260.CEL.gz
1.9 Mb
(ftp)
(http)
CEL
GSM161260.CHP.gz
107.5 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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