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GEO accession:
Sample GSM161253
Query DataSets for GSM161253
Status
Public on Feb 08, 2008
Title
Head_single_housing_6day_male_3_3
Sample type
RNA
Source name
Head_single_housing_6day_male_3_3
Organism
Drosophila melanogaster
Characteristics
head from 6-day-old single-housed male Canton-S
Treatment protocol
new eclosion males were housed individually in vials for 6 days
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
20 single-housed males were frozen in liquid nitrogen between 5pm-6pm. Heads were separated and used for RNA extraction.
Data processing
Rosetta Resolver Platform
Submission date
Feb 08, 2007
Last update date
Aug 28, 2018
Contact name
Liming Wang
E-mail(s)
lmwang@caltech.edu
Phone
626-395-6822
Organization name
California Institute of Technology
Department
216-76， Division of Biology
Lab
David J Anderson
Street address
1200 E. California Bl.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1322
Series (1)
GSE6994
Comparative gene expression profiling of group-housed, less aggressive vs. single-housed, more aggressive male flies
Relations
Reanalyzed by
GSE119084
Data table header descriptions
ID_REF
VALUE
a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION-P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION-P-VALUE
AFFX-BioB-5_at
162.822
P
9.4506e-05
AFFX-BioB-M_at
197.61
P
6.02111e-05
AFFX-BioB-3_at
94.5815
P
6.02111e-05
AFFX-BioC-5_at
312.104
P
6.02111e-05
AFFX-BioC-3_at
320.786
P
4.42873e-05
AFFX-BioDn-5_at
779.09
P
4.42873e-05
AFFX-BioDn-3_at
1619.9
P
5.16732e-05
AFFX-CreX-5_at
4683.08
P
4.42873e-05
AFFX-CreX-3_at
5255.64
P
4.42873e-05
AFFX-DapX-5_at
70.4893
P
0.00010954
AFFX-DapX-M_at
142.572
P
0.000856509
AFFX-DapX-3_at
259.287
P
6.02111e-05
AFFX-LysX-5_at
11.8479
P
0.0464816
AFFX-LysX-M_at
32.7128
A
0.262827
AFFX-LysX-3_at
53.7073
P
4.42873e-05
AFFX-PheX-5_at
21.4236
P
0.00179591
AFFX-PheX-M_at
23.5058
P
0.0396478
AFFX-PheX-3_at
43.9347
P
0.000753643
AFFX-ThrX-5_at
28.6951
P
0.0138105
AFFX-ThrX-M_at
36.1387
P
0.000662269
Total number of rows:
18952
Table truncated, full table size
582 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM161253.CEL.gz
1.9 Mb
(ftp)
(http)
CEL
GSM161253.CHP.gz
106.1 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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