|
| Status |
Public on May 19, 2015 |
| Title |
AOCS_095_ICGC_DBPC_20130205_068 |
| Sample type |
RNA |
| |
|
| Source name |
Ascites
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
tissue: Ascites
cell type: high grade serous ovarian cancer
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated using mirVana miRNA Isolation Kit
|
| Label |
biotin
|
| Label protocol |
NanoString nCounter miRNA Human v2.1 assay
|
| |
|
| Hybridization protocol |
NanoString nCounter PrepStation immobilizes targets to cartridge
|
| Scan protocol |
NanoString Digital Analyzer set to high resolution
|
| Description |
miRNA count data
|
| Data processing |
NanoString nSolver Analysis Software was utilised to check QC metrics and extract raw counts. Expression was normalised for input using a subset of the housekeeping genes.
|
| |
|
| Submission date |
Feb 10, 2015 |
| Last update date |
May 19, 2015 |
| Contact name |
Ann-Marie Patch |
| E-mail(s) |
ann-marie.patch@qimrberghofer.edu.au
|
| Organization name |
QIMR Berghofer Medical Research Institute
|
| Street address |
300 Herston Road
|
| City |
Herston |
| State/province |
QLD |
| ZIP/Postal code |
4006 |
| Country |
Australia |
| |
|
| Platform ID |
GPL19765 |
| Series (2) |
| GSE65819 |
Whole genome characterisation of chemoresistant ovarian cancer [NanoString miRNA] |
| GSE65821 |
Whole genome characterisation of chemoresistant ovarian cancer |
|
