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Sample GSM159288 Query DataSets for GSM159288
Status Public on Apr 15, 2007
Title Drosophila_stwlbam_rep1
Sample type RNA
 
Source name Drosophila ovary, stwl bam double mutant
Organism Drosophila melanogaster
Characteristics Genotype: stwl bam double mutant
Aged 3-5 days
Biomaterial provider McKearin lab
Treatment protocol None
Growth protocol Standard cornmeal molasses + dry yeast
Extracted molecule total RNA
Extraction protocol Total RNA extracted with TRIzol reagent
Label biotin
Label protocol Standard labeling protocol
 
Hybridization protocol Full protocol at: http://microarray.swmed.edu/AffyHybProtocol.htm
Scan protocol Standard Affymetrix scanning protocol
Description Drosophila ovary, stwl bam double mutant
Data processing Affymetrix GCOS
GeneSpring
 
Submission date Jan 29, 2007
Last update date Aug 28, 2018
Contact name Dennis McKearin
Phone 214-648-4944
Organization name UT Southwestern Med. Ctr.
Department Molecular Biology
Street address 6000 Harry Hines Blvd., NA5.214
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL1322
Series (1)
GSE6928 Stonewalling Drosophila stem cell differentiation by epigenetic controls
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
Stat Pairs Number of oligo pairs per chip
Stat Pairs Used Number of oligo pairs detected
VALUE Signal intensity
ABS_CALL Call flag (present/absent)
DETECTION P-VALUE Statistical P-value

Data table
ID_REF Stat Pairs Stat Pairs Used VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 20 20 112.8 P 0.000509
AFFX-BioB-M_at 20 20 166.2 P 0.00034
AFFX-BioB-3_at 20 20 95.2 P 0.009332
AFFX-BioC-5_at 20 20 274 P 0.000446
AFFX-BioC-3_at 20 20 278.8 P 0.000095
AFFX-BioDn-5_at 20 20 751.8 P 0.000044
AFFX-BioDn-3_at 20 20 2073.7 P 0.000127
AFFX-CreX-5_at 20 20 5851.9 P 0.000052
AFFX-CreX-3_at 20 20 8663.5 P 0.000044
AFFX-DapX-5_at 20 20 1.4 A 0.876448
AFFX-DapX-M_at 20 20 9.6 A 0.368438
AFFX-DapX-3_at 20 20 1.8 A 0.824735
AFFX-LysX-5_at 20 20 0.8 A 0.86866
AFFX-LysX-M_at 20 20 1.8 A 0.772364
AFFX-LysX-3_at 20 20 7.9 A 0.354453
AFFX-PheX-5_at 20 20 1 A 0.910522
AFFX-PheX-M_at 20 20 2.9 A 0.574038
AFFX-PheX-3_at 20 20 11.6 A 0.354453
AFFX-ThrX-5_at 20 20 13.8 A 0.250796
AFFX-ThrX-M_at 20 20 1 A 0.883887

Total number of rows: 18952

Table truncated, full table size 617 Kbytes.




Supplementary file Size Download File type/resource
GSM159288.CEL.gz 3.2 Mb (ftp)(http) CEL

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