|
Status |
Public on May 28, 2015 |
Title |
genomic DNA from whole blood of subject Sample7 |
Sample type |
genomic |
|
|
Source name |
Whole Blood
|
Organism |
Homo sapiens |
Characteristics |
tissue: whole blood Sex: male age: 42.4 dna methylation age: 39.27991639 age acceleration vs controls: -2.122523428 age acceleration vs controls in children: NA cor sample vs gold standard: 0.966948846 disease status: Control family number: NA relation to proband: NA
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA was extracted and purified from EDTA tubes using the RecoverEase DNA Isolation Kit.
|
Label |
Cy3 and Cy5
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Data processing |
BeadStudio software v3.2. Unmethylated and methylated signal intensities and detection p values in Series supplementary file
|
|
|
Submission date |
Dec 23, 2014 |
Last update date |
May 28, 2015 |
Contact name |
Steve Horvath |
E-mail(s) |
shorvath@altoslabs.com
|
Organization name |
University of California, Los Angeles
|
Department |
Human Genetics
|
Lab |
Horvath
|
Street address |
695 Charles E. Young Drive South, Box 708822
|
City |
Los Angeles |
State/province |
CA |
ZIP/Postal code |
90095-7088 |
Country |
USA |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE64495 |
DNA methylation profiles of human blood samples from a severe developmental disorder and controls |
|