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Sample GSM1532419 Query DataSets for GSM1532419
Status Public on Oct 28, 2014
Title heart_atrial fibrilation_rep1.
Sample type genomic
 
Source name left atrium,atrial fibrillation,permanent
Organism Homo sapiens
Characteristics tissue: left atrium
condition: atrial fibrillation, permanent
tag: male
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted and purified from left atrium samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description atrial fibrillation
SAMPLE 1
Data processing GenomeStudio software V2011.1.
 
Submission date Oct 27, 2014
Last update date Oct 28, 2014
Contact name Jian Zhou
E-mail(s) hebeizhoujian@126.com
Phone 010-85231146
Organization name Chaoyang Hospital
Street address Gongtinan Road 8
City Beijing
ZIP/Postal code 100020
Country China
 
Platform ID GPL13534
Series (1)
GSE62727 Genome-wide DNA methylation analysis in permanent atrial fibrillation

Data table header descriptions
ID_REF
VALUE average beta
Detection Pval

Data table
ID_REF VALUE Detection Pval
cg00000029 0.2959501 0
cg00000108 0.9441653 0
cg00000109 0.7243363 0
cg00000165 0.28125 0
cg00000236 0.7519601 0
cg00000289 0.5727536 0
cg00000292 0.8177458 0
cg00000321 0.3259203 0
cg00000363 0.284025 0
cg00000622 0.0202329 0
cg00000658 0.8394461 0
cg00000714 0.1198122 0
cg00000721 0.8533297 0
cg00000734 0.073164 0
cg00000769 0.05385588 0
cg00000807 0.8201749 0
cg00000884 0.8338714 0
cg00000905 0.1597981 0
cg00000924 0.6742918 0
cg00000948 0.9230872 0

Total number of rows: 485577

Table truncated, full table size 10972 Kbytes.




Supplementary file Size Download File type/resource
GSM1532419_6929718127_R01C01_Grn.idat.gz 4.0 Mb (ftp)(http) IDAT
GSM1532419_6929718127_R01C01_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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