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GEO accession:
Sample GSM1518247
Query DataSets for GSM1518247
Status
Public on Feb 28, 2015
Title
47626.1
Sample type
genomic
Source name
pre-symptomatic_AD_TP1
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Male
age: 68
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.548932598
cg00000108
0.906632787
cg00000109
0.812172169
cg00000165
0.315538819
cg00000236
0.733958134
cg00000289
0.515970257
cg00000292
0.80605104
cg00000321
0.312962933
cg00000363
0.394276933
cg00000622
0.052476561
cg00000658
0.781356446
cg00000714
0.25249043
cg00000721
0.862785386
cg00000734
0.1112513
cg00000769
0.100168496
cg00000807
0.794421128
cg00000884
0.796855687
cg00000905
0.138629294
cg00000924
0.569078508
cg00000948
0.815836674
Total number of rows:
485577
Table truncated, full table size
10865 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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