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GEO accession:
Sample GSM1518236
Query DataSets for GSM1518236
Status
Public on Feb 28, 2015
Title
91507.2
Sample type
genomic
Source name
pre-symptomatic_AD_TP2
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Female
age: 73
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.527144803
cg00000108
0.897838456
cg00000109
0.795789158
cg00000165
0.255297831
cg00000236
0.742562395
cg00000289
0.537272826
cg00000292
0.798488059
cg00000321
0.384163826
cg00000363
0.422099039
cg00000622
0.057067006
cg00000658
0.790393903
cg00000714
0.227777426
cg00000721
0.86499081
cg00000734
0.102153474
cg00000769
0.087442007
cg00000807
0.779728552
cg00000884
0.802367899
cg00000905
0.150755767
cg00000924
0.516581151
cg00000948
0.838658386
Total number of rows:
485577
Table truncated, full table size
10865 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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