GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM1518231
Query DataSets for GSM1518231
Status
Public on Feb 28, 2015
Title
80182.1
Sample type
genomic
Source name
pre-symptomatic_AD_TP1
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Female
age: 78
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.572994533
cg00000108
0.914715188
cg00000109
0.793633024
cg00000165
0.304998872
cg00000236
0.709224084
cg00000289
0.568592123
cg00000292
0.81822622
cg00000321
0.288432494
cg00000363
0.374957013
cg00000622
0.057384627
cg00000658
0.785103121
cg00000714
0.207042335
cg00000721
0.872797894
cg00000734
0.106188254
cg00000769
0.086308389
cg00000807
0.786455764
cg00000884
0.795447289
cg00000905
0.166976163
cg00000924
0.529216577
cg00000948
0.868041556
Total number of rows:
485577
Table truncated, full table size
10865 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
