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GEO accession:
Sample GSM1518224
Query DataSets for GSM1518224
Status
Public on Feb 28, 2015
Title
92308.2
Sample type
genomic
Source name
pre-symptomatic_AD_TP2
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Male
age: 68
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.561744577
cg00000108
0.893259924
cg00000109
0.783581981
cg00000165
0.308772277
cg00000236
0.746903191
cg00000289
0.532618673
cg00000292
0.833203542
cg00000321
0.326588683
cg00000363
0.500374876
cg00000622
0.061587863
cg00000658
0.79472353
cg00000714
0.224460147
cg00000721
0.865507536
cg00000734
0.105596175
cg00000769
0.103671068
cg00000807
0.738124183
cg00000884
0.810876784
cg00000905
0.172430761
cg00000924
0.537139296
cg00000948
0.831040494
Total number of rows:
485577
Table truncated, full table size
10864 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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