GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM1518212
Query DataSets for GSM1518212
Status
Public on Feb 28, 2015
Title
73576.2
Sample type
genomic
Source name
pre-symptomatic_AD_TP2
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Male
age: 73
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.475636536
cg00000108
0.883354474
cg00000109
0.804323291
cg00000165
0.229878858
cg00000236
0.694294173
cg00000289
0.594689561
cg00000292
0.767439815
cg00000321
0.392461406
cg00000363
0.321542306
cg00000622
0.053509368
cg00000658
0.784633955
cg00000714
0.209438181
cg00000721
0.879476985
cg00000734
0.103567313
cg00000769
0.117501319
cg00000807
0.80581684
cg00000884
0.80505213
cg00000905
0.16361378
cg00000924
0.525038606
cg00000948
0.821647548
Total number of rows:
485577
Table truncated, full table size
10865 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
