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GEO accession:
Sample GSM1518211
Query DataSets for GSM1518211
Status
Public on Feb 28, 2015
Title
73576.1
Sample type
genomic
Source name
pre-symptomatic_AD_TP1
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Male
age: 73
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.516419772
cg00000108
0.905410274
cg00000109
0.810609799
cg00000165
0.250727069
cg00000236
0.759985928
cg00000289
0.550193493
cg00000292
0.784936543
cg00000321
0.329409167
cg00000363
0.361447276
cg00000622
0.051689731
cg00000658
0.781552559
cg00000714
0.209146561
cg00000721
0.867696136
cg00000734
0.112628315
cg00000769
0.100878313
cg00000807
0.807047895
cg00000884
0.777264156
cg00000905
0.141689344
cg00000924
0.554805657
cg00000948
0.8480727
Total number of rows:
485577
Table truncated, full table size
10865 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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