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GEO accession:
Sample GSM1518204
Query DataSets for GSM1518204
Status
Public on Feb 28, 2015
Title
7951.1
Sample type
genomic
Source name
pre-symptomatic_AD_TP1
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Female
age: 88
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.529675097
cg00000108
0.904130087
cg00000109
0.778972422
cg00000165
0.300405194
cg00000236
0.703662925
cg00000289
0.589714847
cg00000292
0.832414217
cg00000321
0.400049508
cg00000363
0.426652957
cg00000622
0.055774288
cg00000658
0.795944964
cg00000714
0.228330092
cg00000721
0.840501324
cg00000734
0.110674725
cg00000769
0.094197425
cg00000807
0.77156658
cg00000884
0.786975387
cg00000905
0.156776591
cg00000924
0.546280275
cg00000948
0.876357466
Total number of rows:
485577
Table truncated, full table size
10865 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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