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GEO accession:
Sample GSM1518201
Query DataSets for GSM1518201
Status
Public on Feb 28, 2015
Title
32093.2
Sample type
genomic
Source name
pre-symptomatic_AD_TP2
Organism
Homo sapiens
Characteristics
tissue: Whole blood
Sex: Male
age: 72
Extracted molecule
genomic DNA
Extraction protocol
Phenol chloroform DNA extraction
Label
Cy3 and Cy5
Label protocol
Illumina Infinium protocol
Hybridization protocol
Illumina Infinium protocol
Scan protocol
Illumina Infinium protocol scanned using Illumina HiScan System
Data processing
Data loaded into R using methylumi
Beta, methylated and unmethylated signal and wateRmelon normalised betas are available on the series record.
Submission date
Oct 02, 2014
Last update date
Feb 28, 2015
Contact name
Rebecca Georgina Smith
E-mail(s)
r.g.smith@exeter.ac.uk
Organization name
University of Exeter
Department
Medical School
Street address
RILD, RD and E
City
Exeter
State/province
Devon
ZIP/Postal code
EX2 5DW
Country
United Kingdom
Platform ID
GPL13534
Series (1)
GSE62003
Blood methylomic signatures of pre-symptomatic dementia in elderly subjects with Type 2 Diabetes Mellitus
Data table header descriptions
ID_REF
VALUE
wateRmelon normalized beta
Data table
ID_REF
VALUE
cg00000029
0.512699095
cg00000108
0.882238989
cg00000109
0.806204857
cg00000165
0.288950459
cg00000236
0.737566927
cg00000289
0.638094969
cg00000292
0.814128953
cg00000321
0.472760813
cg00000363
0.396670994
cg00000622
0.062522367
cg00000658
0.737856201
cg00000714
0.209472047
cg00000721
0.858254885
cg00000734
0.132610039
cg00000769
0.144498012
cg00000807
0.755548506
cg00000884
0.814757781
cg00000905
0.21398988
cg00000924
0.505259808
cg00000948
0.836337608
Total number of rows:
485577
Table truncated, full table size
10864 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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