|
| Status |
Public on Jun 04, 2014 |
| Title |
09_YS_N_24H |
| Sample type |
RNA |
| |
|
| Source name |
09_YS_N_24H
|
| Organism |
Homo sapiens |
| Characteristics |
nr [a]: 2.1
surgery [a]: TRUE
epo_nacl [a]: NaCl
timepoint [a]: 24h
row_pos [a]: r3p5
nr [a]: 8.6 d
group [a]: F
illumina_hyb: 4019614127_A
oligo_hyb: GL_9kir_cy3_4ejkir_cy5
oligo_hyb: GL_9kir_cy5_4ejkir_cy3
project: 5/2007
column name mev: 09_YS_N_24H.AVG_Signal
tissue: xenografted human Head and Neck squamous Cell Cancer (HNSCC) tumours on Balb/c nude mice
treatment: Surgery (=TRUE) + NaCl 24 hours after surgical resection
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol
|
| Label |
biotin
|
| Label protocol |
standard Illumina protocol
|
| |
|
| Hybridization protocol |
standard Illumina protocol
|
| Scan protocol |
standard Illumina protocol
|
| Data processing |
The raw data provided in the submitted file was log2 transformed and set for detection p-value <= 0.05. Probes that did not have a gene symbol were also removed and the remaining probes were median centered.
|
| |
|
| Submission date |
Jun 03, 2014 |
| Last update date |
Jun 04, 2014 |
| Contact name |
Gustaf Lindgren |
| E-mail(s) |
gustaf.lindgren@med.lu.se
|
| Organization name |
Lund University
|
| Department |
Depoartment of Otolaryngology/Head and Neck surgery
|
| Street address |
Lasarettsgatan 21
|
| City |
Lund |
| ZIP/Postal code |
22185 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL13376 |
| Series (1) |
| GSE58194 |
Erythropoietin suppresses the activation of pro-apoptotic genes in head and neck squamous cell carcinoma xenografts exposed to surgical trauma |
|
