|
Status |
Public on Sep 24, 2014 |
Title |
Genomic DNA from LC15 at T1 |
Sample type |
genomic |
|
|
Source name |
Case at T1
|
Organism |
Homo sapiens |
Characteristics |
cell type: lymphocyte cells (LC) gender: male disease state: alcohol consumption sample type: case time point: T1 individual: 15
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Genomic DNA was extracted and purified from LC samples using the QIAmp DNA Blood Mini Kit according to standard instructions.
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina protocol.
|
|
|
Hybridization protocol |
Bisulfite-converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation450 BeadChip using the standard Illumina protocol.
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting.
|
Description |
Sample 22 LC15-1 Case at T1 LC sample.
|
Data processing |
Genome Studios V2011.1.
|
|
|
Submission date |
May 20, 2014 |
Last update date |
Sep 24, 2014 |
Contact name |
Robert Alan Philibert |
E-mail(s) |
robert-philibert@uiowa.edu
|
Organization name |
University of Iowa
|
Street address |
500 Newton Rd
|
City |
Iowa City |
State/province |
IA |
ZIP/Postal code |
52242 |
Country |
USA |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE57853 |
Epigenome analysis of alcohol consumption in lymphocyte cell (LC) samples |
|