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GEO accession:
Sample GSM136381
Query DataSets for GSM136381
Status
Public on Sep 30, 2007
Title
LCM tumor epithelium sample from patient #45
Sample type
RNA
Source name
human breast cancer tumor epithelium
Organism
Homo sapiens
Characteristics
diagnosis: IBC
status: Deceased
Extracted molecule
total RNA
Extraction protocol
PicoPure kit (Arcturus)
Label
biotin
Label protocol
Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol
Standard Affy protocol
Scan protocol
Standard Affy protocol
Description
Chemo: No, ER: POS, Her2Neu: POS, Stage: IIIA, Clinical IBC: No
Data processing
RMA
Submission date
Sep 15, 2006
Last update date
Feb 17, 2016
Contact name
Stefan Ambs
Organization name
NCI
Lab
LHC
Street address
37 Convent Dr Bldg 37 Room 3050
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platform ID
GPL96
Series (1)
GSE5847
Tumor and stroma from breast by LCM
Relations
Reanalyzed by
GSE47561
Data table header descriptions
ID_REF
Affy ID
VALUE
RMA log 2 expression levels
Data table
ID_REF
VALUE
1007_s_at
11.00410881
1053_at
5.904336096
117_at
6.277389918
121_at
8.284373124
1255_g_at
4.151805065
1294_at
8.235578265
1316_at
7.288266871
1320_at
4.889152042
1405_i_at
6.172135621
1431_at
4.086660617
1438_at
6.718079998
1487_at
7.428584249
1494_f_at
6.938854477
1598_g_at
9.667176827
160020_at
7.849711253
1729_at
8.374073755
1773_at
5.247541764
177_at
5.112581579
179_at
8.688566685
1861_at
6.074427328
Total number of rows:
22283
Table truncated, full table size
496 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM136381.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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