|
| Status |
Public on Jun 03, 2015 |
| Title |
NB1 |
| Sample type |
RNA |
| |
|
| Source name |
Neuroblastoma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue type: Neuroblastoma
tissue group: tumoral tissue
stumor stage (inss classification): Stage 1
mycn status: non-amplified
age at diagnosis (months): <18m
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was isolated from snap-frozen samples using TriReagent from Sigma following manufacturers’ protocols.
|
| Label |
biotin
|
| Label protocol |
Standard Affymetrix Protocol.
|
| |
|
| Hybridization protocol |
Standard Affyemtrix protocol.
|
| Scan protocol |
Arrays were imaged using standard recommended Affyemtrix scanner setting.
|
| Description |
HSJD12_1
|
| Data processing |
R Package (Du P et al. Bioinformatics 2008) version 3.0.1; available through Bioconductor (www.bioconductor.org).
|
| |
|
| Submission date |
Feb 06, 2014 |
| Last update date |
Jun 03, 2015 |
| Contact name |
Cinzia Lavarino |
| E-mail(s) |
clavarino@fsjd.org
|
| Phone |
+34932804000
|
| Organization name |
Hospital Sant Joan de Déu
|
| Department |
Oncology
|
| Lab |
Oncology
|
| Street address |
Santa Rosa 39-57
|
| City |
Esplugues de Llobregat |
| State/province |
Barcelona |
| ZIP/Postal code |
08950 |
| Country |
Spain |
| |
|
| Platform ID |
GPL13667 |
| Series (2) |
| GSE54720 |
DNA methylation changes at CpG and non-CpG sites are associated with development and clinical behavior in neuroblastoma [gene expression] |
| GSE54721 |
DNA methylation changes at CpG and non-CpG sites are associated with development and clinical behavior in neuroblastoma. |
|
