|
Status |
Public on Apr 02, 2014 |
Title |
UC Sample 96 |
Sample type |
genomic |
|
|
Source name |
Umbilical cord
|
Organism |
Homo sapiens |
Characteristics |
gender: Male ethnicity: Malay
|
Extracted molecule |
genomic DNA |
Extraction protocol |
A weighed amount of pulverized umbilical cord tissue was lysed and homogenised via Hyaluronidase solution treatment, addition of TNES lysis buffer and Proteinase K.
|
Label |
C-Bio and A-DNP
|
Label protocol |
Standard Illumina protocol using the Infinium OmniExpressExome DNA Analysis Kit v 1.2
|
|
|
Hybridization protocol |
Standard Illumina protocol; standard hybridization for Illumina is 48C for 16-24 hours
|
Scan protocol |
Standard Illumina protocol on the Illumina iScan
|
Data processing |
Standard Illumina protocol for Infinium Human Genotyping beadchips Beadchip quantificatin and processing in GenomeStudio v2011.1
|
|
|
Submission date |
Jan 27, 2014 |
Last update date |
Apr 02, 2014 |
Contact name |
Dennis Wang |
Organization name |
Singapore Institute for Clinical Sciences
|
Street address |
30 Medical Drive
|
City |
Singapore |
ZIP/Postal code |
117609 |
Country |
Singapore |
|
|
Platform ID |
GPL18224 |
Series (2) |
GSE54445 |
The effect of genotype and in utero environment on inter-individual variation in neonate DNA methylomes (genotypes) |
GSE54446 |
The effect of genotype and in utero environment on inter-individual variation in neonate DNA methylomes |
|