|
| Status |
Public on Apr 02, 2014 |
| Title |
UC Sample 85 |
| Sample type |
genomic |
| |
|
| Source name |
Umbilical cord
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
ethnicity: Chinese
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
A weighed amount of pulverized umbilical cord tissue was lysed and homogenised via Hyaluronidase solution treatment, addition of TNES lysis buffer and Proteinase K.
|
| Label |
C-Bio and A-DNP
|
| Label protocol |
Standard Illumina protocol using the Infinium OmniExpressExome DNA Analysis Kit v 1.2
|
| |
|
| Hybridization protocol |
Standard Illumina protocol; standard hybridization for Illumina is 48C for 16-24 hours
|
| Scan protocol |
Standard Illumina protocol on the Illumina iScan
|
| Data processing |
Standard Illumina protocol for Infinium Human Genotyping beadchips Beadchip quantificatin and processing in GenomeStudio v2011.1
|
| |
|
| Submission date |
Jan 27, 2014 |
| Last update date |
Apr 02, 2014 |
| Contact name |
Dennis Wang |
| Organization name |
Singapore Institute for Clinical Sciences
|
| Street address |
30 Medical Drive
|
| City |
Singapore |
| ZIP/Postal code |
117609 |
| Country |
Singapore |
| |
|
| Platform ID |
GPL18224 |
| Series (2) |
| GSE54445 |
The effect of genotype and in utero environment on inter-individual variation in neonate DNA methylomes (genotypes) |
| GSE54446 |
The effect of genotype and in utero environment on inter-individual variation in neonate DNA methylomes |
|
