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Sample GSM1303688 Query DataSets for GSM1303688
Status Public on Sep 03, 2014
Title UK28768 BA10
Sample type genomic
 
Source name UK28768
Organism Homo sapiens
Characteristics gender: Male
sample type: frontal cortex (BA10)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.29926 1689 764 0
cg00000108 0.73168 636 2007 0
cg00000109 0.49492 645 730 0
cg00000165 0.10911 2178 279 0
cg00000236 0.57775 625 992 0
cg00000289 0.26204 835 332 0
cg00000292 0.49122 2072 2097 0
cg00000321 0.36089 2962 1729 0
cg00000363 0.11713 5116 692 0
cg00000622 0.04312 8577 391 0
cg00000658 0.62448 1612 2847 0
cg00000714 0.08249 9376 852 0
cg00000721 0.68779 442 1194 0
cg00000734 0.05351 6232 358 0
cg00000769 0.08415 3165 300 0
cg00000807 0.73636 1412 4223 0
cg00000884 0.59475 764 1268 0
cg00000905 0.08899 2316 236 0
cg00000924 0.36645 4836 2855 0
cg00000948 0.73728 1072 3289 0

Total number of rows: 485577

Table truncated, full table size 14332 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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