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Sample GSM1303680 Query DataSets for GSM1303680
Status Public on Sep 03, 2014
Title AN06420 BA10
Sample type genomic
 
Source name AN06420
Organism Homo sapiens
Characteristics gender: Male
sample type: frontal cortex (BA10)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.35645 1960 1141 0
cg00000108 0.78381 939 3767 0
cg00000109 0.5522 981 1333 0
cg00000165 0.14615 3160 558 0
cg00000236 0.63895 942 1844 0
cg00000289 0.35793 1118 679 0
cg00000292 0.52342 4132 4648 0
cg00000321 0.42889 4036 3106 0
cg00000363 0.13718 7894 1271 0
cg00000622 0.04843 13378 686 0
cg00000658 0.66822 2113 4457 0
cg00000714 0.11009 14393 1793 0
cg00000721 0.72903 869 2607 0
cg00000734 0.06698 10514 762 0
cg00000769 0.06684 6029 439 0
cg00000807 0.76834 2325 8043 0
cg00000884 0.69405 943 2366 0
cg00000905 0.0849 3953 376 0
cg00000924 0.36893 8314 4919 0
cg00000948 0.75013 1783 5653 0

Total number of rows: 485577

Table truncated, full table size 14524 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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