NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1303679 Query DataSets for GSM1303679
Status Public on Sep 03, 2014
Title AN04166 BA10
Sample type genomic
 
Source name AN04166
Organism Homo sapiens
Characteristics gender: Male
sample type: frontal cortex (BA10)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.42619 1824 1429 0
cg00000108 0.78007 1134 4377 0
cg00000109 0.60423 817 1400 0
cg00000165 0.16914 3206 673 0
cg00000236 0.62709 1084 1991 0
cg00000289 0.34886 1298 749 0
cg00000292 0.57945 3542 5018 0
cg00000321 0.40137 5241 3581 0
cg00000363 0.17473 8274 1773 0
cg00000622 0.04856 13185 678 0
cg00000658 0.69783 1859 4524 0
cg00000714 0.10371 16268 1894 0
cg00000721 0.78651 745 3113 0
cg00000734 0.07792 10668 910 0
cg00000769 0.06942 6951 526 0
cg00000807 0.75728 3135 10093 0
cg00000884 0.6738 1120 2520 0
cg00000905 0.08956 4241 427 0
cg00000924 0.38202 9179 5736 0
cg00000948 0.77914 1876 6971 0

Total number of rows: 485577

Table truncated, full table size 14563 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap