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Sample GSM1303676 Query DataSets for GSM1303676
Status Public on Sep 03, 2014
Title AN04479 BA24
Sample type genomic
 
Source name AN04479
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.36162 1969 1172 0
cg00000108 0.77501 768 2990 0
cg00000109 0.53895 912 1183 0
cg00000165 0.11677 3387 461 0
cg00000236 0.62538 895 1661 0
cg00000289 0.38638 702 505 0
cg00000292 0.47254 2983 2762 0
cg00000321 0.33544 4322 2232 0
cg00000363 0.12398 7093 1018 0
cg00000622 0.05417 10743 621 0
cg00000658 0.63283 1763 3211 0
cg00000714 0.11668 11687 1557 0
cg00000721 0.71253 740 2082 0
cg00000734 0.05267 7940 447 0
cg00000769 0.07173 4028 319 0
cg00000807 0.69727 2291 5507 0
cg00000884 0.64599 1007 2020 0
cg00000905 0.06932 3565 273 0
cg00000924 0.35262 7161 3955 0
cg00000948 0.73 1348 3915 0

Total number of rows: 485577

Table truncated, full table size 14456 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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