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Sample GSM1303675 Query DataSets for GSM1303675
Status Public on Sep 03, 2014
Title AN00142 BA24
Sample type genomic
 
Source name AN00142
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.35111 1676 961 0
cg00000108 0.72407 706 2115 0
cg00000109 0.53741 747 984 0
cg00000165 0.1229 3033 439 0
cg00000236 0.55164 777 1079 0
cg00000289 0.25793 976 374 0
cg00000292 0.45869 2796 2454 0
cg00000321 0.32449 4357 2141 0
cg00000363 0.13154 6311 971 0
cg00000622 0.04707 9497 474 0
cg00000658 0.63288 1588 2910 0
cg00000714 0.1036 10794 1259 0
cg00000721 0.68544 559 1436 0
cg00000734 0.06177 6720 449 0
cg00000769 0.07958 3474 309 0
cg00000807 0.70324 1964 4891 0
cg00000884 0.63283 826 1596 0
cg00000905 0.07462 2740 229 0
cg00000924 0.32568 6600 3236 0
cg00000948 0.71647 1365 3702 0

Total number of rows: 485577

Table truncated, full table size 14402 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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