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Sample GSM1303671 Query DataSets for GSM1303671
Status Public on Sep 03, 2014
Title AN19760 BA24
Sample type genomic
 
Source name AN19760
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.41755 1779 1347 0
cg00000108 0.77494 904 3457 0
cg00000109 0.60294 656 1148 0
cg00000165 0.14999 2847 520 0
cg00000236 0.66106 645 1453 0
cg00000289 0.39727 827 611 0
cg00000292 0.61087 2434 3978 0
cg00000321 0.36696 4054 2408 0
cg00000363 0.21508 6418 1786 0
cg00000622 0.04724 10911 546 0
cg00000658 0.73643 1167 3540 0
cg00000714 0.12238 14946 2098 0
cg00000721 0.76183 690 2527 0
cg00000734 0.06478 7638 536 0
cg00000769 0.07064 5912 457 0
cg00000807 0.79579 2245 9138 0
cg00000884 0.6736 904 2072 0
cg00000905 0.16727 2414 505 0
cg00000924 0.41121 8123 5743 0
cg00000948 0.81367 1315 6179 0

Total number of rows: 485577

Table truncated, full table size 14465 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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