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Sample GSM1303665 Query DataSets for GSM1303665
Status Public on Sep 03, 2014
Title AN01971 BA24
Sample type genomic
 
Source name AN01971
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.43452 1230 1022 0
cg00000108 0.80214 676 3146 0
cg00000109 0.57247 664 1023 0
cg00000165 0.12623 2565 385 0
cg00000236 0.68294 673 1665 0
cg00000289 0.38732 770 550 0
cg00000292 0.5 2441 2541 0
cg00000321 0.35152 4154 2306 0
cg00000363 0.18753 6104 1432 0
cg00000622 0.05781 9679 600 0
cg00000658 0.71795 1385 3780 0
cg00000714 0.10475 11643 1374 0
cg00000721 0.77774 547 2264 0
cg00000734 0.06461 7081 496 0
cg00000769 0.05967 4848 314 0
cg00000807 0.82028 1412 6901 0
cg00000884 0.6601 780 1709 0
cg00000905 0.07657 2686 231 0
cg00000924 0.41185 6125 4359 0
cg00000948 0.77279 1306 4782 0

Total number of rows: 485577

Table truncated, full table size 14396 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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