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Sample GSM1303663 Query DataSets for GSM1303663
Status Public on Sep 03, 2014
Title AN08166 BA24
Sample type genomic
 
Source name AN08166
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.32407 1068 560 0
cg00000108 0.63221 601 1205 0
cg00000109 0.39429 473 373 0
cg00000165 0.085 1687 166 0
cg00000236 0.56728 347 586 0
cg00000289 0.23664 600 217 0
cg00000292 0.39085 2350 1572 0
cg00000321 0.26635 2941 1104 0
cg00000363 0.1163 4140 558 0
cg00000622 0.03847 9172 371 0
cg00000658 0.53615 1395 1728 0
cg00000714 0.06017 10115 654 0
cg00000721 0.62667 348 752 0
cg00000734 0.03747 7222 285 0
cg00000769 0.06226 2310 160 0
cg00000807 0.63131 1586 2887 0
cg00000884 0.49582 624 712 0
cg00000905 0.06612 1934 144 0
cg00000924 0.23851 5698 1816 0
cg00000948 0.61504 1205 2085 0

Total number of rows: 485577

Table truncated, full table size 14248 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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