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Sample GSM1303661 Query DataSets for GSM1303661
Status Public on Sep 03, 2014
Title AN12457 BA24
Sample type genomic
 
Source name AN12457
Organism Homo sapiens
Characteristics gender: Female
sample type: cingulate cortex (BA24)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.43827 1943 1594 0
cg00000108 0.78667 1049 4237 0
cg00000109 0.66244 806 1778 0
cg00000165 0.14335 3611 621 0
cg00000236 0.6832 909 2176 0
cg00000289 0.38779 923 648 0
cg00000292 0.47922 3772 3563 0
cg00000321 0.28962 5848 2425 0
cg00000363 0.19143 8377 2007 0
cg00000622 0.04789 13279 673 0
cg00000658 0.6753 1906 4172 0
cg00000714 0.11068 13624 1708 0
cg00000721 0.77676 682 2721 0
cg00000734 0.06276 10294 696 0
cg00000769 0.06267 6286 427 0
cg00000807 0.76643 2270 7777 0
cg00000884 0.67538 1142 2584 0
cg00000905 0.08423 3825 361 0
cg00000924 0.371 8323 4968 0
cg00000948 0.75671 1748 5748 0

Total number of rows: 485577

Table truncated, full table size 14526 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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