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Sample GSM1303660 Query DataSets for GSM1303660
Status Public on Sep 03, 2014
Title AN06420 BA24
Sample type genomic
 
Source name AN06420
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: autism
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.34397 1792 992 0
cg00000108 0.75811 914 3178 0
cg00000109 0.54694 1010 1340 0
cg00000165 0.10933 3232 409 0
cg00000236 0.63013 801 1535 0
cg00000289 0.31666 979 500 0
cg00000292 0.51837 3388 3754 0
cg00000321 0.36914 4405 2636 0
cg00000363 0.13353 7933 1238 0
cg00000622 0.04915 11875 619 0
cg00000658 0.61813 1943 3307 0
cg00000714 0.09607 13138 1407 0
cg00000721 0.73376 642 2045 0
cg00000734 0.05684 8893 542 0
cg00000769 0.06319 4674 322 0
cg00000807 0.72074 2310 6220 0
cg00000884 0.66971 912 2052 0
cg00000905 0.08072 3624 327 0
cg00000924 0.33019 8077 4031 0
cg00000948 0.76 1346 4579 0

Total number of rows: 485577

Table truncated, full table size 14468 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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