NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1303651 Query DataSets for GSM1303651
Status Public on Sep 03, 2014
Title AN17425 BA10
Sample type genomic
 
Source name AN17425
Organism Homo sapiens
Characteristics gender: Male
sample type: frontal cortex (BA10)
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.2229 1563 477 0
cg00000108 0.60755 752 1319 0
cg00000109 0.46667 564 581 0
cg00000165 0.08263 2631 246 0
cg00000236 0.46181 654 647 0
cg00000289 0.24066 632 232 0
cg00000292 0.31205 2400 1134 0
cg00000321 0.23242 3272 1021 0
cg00000363 0.08151 6064 547 0
cg00000622 0.04564 9038 437 0
cg00000658 0.4692 1365 1295 0
cg00000714 0.05775 9837 609 0
cg00000721 0.58681 533 899 0
cg00000734 0.0345 6504 236 0
cg00000769 0.0762 1779 155 0
cg00000807 0.59511 1473 2312 0
cg00000884 0.52234 659 830 0
cg00000905 0.047 2698 138 0
cg00000924 0.20331 5766 1497 0
cg00000948 0.60394 1007 1688 0

Total number of rows: 485577

Table truncated, full table size 14265 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap