NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1303646 Query DataSets for GSM1303646
Status Public on Sep 03, 2014
Title AN12137 BA10
Sample type genomic
 
Source name AN12137
Organism Homo sapiens
Characteristics gender: Male
sample type: frontal cortex (BA10)
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.31859 1780 879 0
cg00000108 0.77594 846 3276 0
cg00000109 0.57419 715 1099 0
cg00000165 0.13964 2802 471 0
cg00000236 0.61146 965 1676 0
cg00000289 0.30468 1162 553 0
cg00000292 0.55521 3372 4334 0
cg00000321 0.31052 4514 2078 0
cg00000363 0.13322 8267 1286 0
cg00000622 0.05016 12834 683 0
cg00000658 0.63762 1663 3102 0
cg00000714 0.10419 14989 1755 0
cg00000721 0.75787 661 2382 0
cg00000734 0.06886 9352 699 0
cg00000769 0.05654 4889 299 0
cg00000807 0.74867 2075 6479 0
cg00000884 0.64103 913 1809 0
cg00000905 0.06921 3652 279 0
cg00000924 0.35062 7612 4164 0
cg00000948 0.753 1524 4951 0

Total number of rows: 485577

Table truncated, full table size 14477 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap