|
| Status |
Public on Nov 22, 2013 |
| Title |
IbxLdBC6 |
| Sample type |
RNA |
| |
|
| Source name |
Longissimus dorsi, male
|
| Organism |
Sus scrofa |
| Characteristics |
Sex: male
age: 179 days
slaughter batch: 2
carcass weight: 61.9 kg
|
| Treatment protocol |
Longissimus dorsii muscle were manteined at -80 ºC
|
| Growth protocol |
Pigs were fed ad libitum
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RiboPure RNA isolation kit
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol
|
| Scan protocol |
GCOS
|
| Description |
Gene expression data from Longissimus dorsi tissue, male
IberianxLandrace Backcross, ID 6
|
| Data processing |
Bioconductor, GCRMA. Probes filtered by 20% of expression values over 1.5 times the median expression of all arrays
|
| |
|
| Submission date |
Nov 21, 2013 |
| Last update date |
Nov 22, 2013 |
| Contact name |
Ana Isabel Fernandez |
| E-mail(s) |
avila@inia.es
|
| Phone |
+34 91 3478717
|
| Organization name |
INIA
|
| Department |
Animal Breeding and Genetics
|
| Street address |
Ctra. Coruña Km7.5
|
| City |
Madrid |
| State/province |
Madrid |
| ZIP/Postal code |
28040 |
| Country |
Spain |
| |
|
| Platform ID |
GPL3533 |
| Series (1) |
| GSE52626 |
Expression data from longissimus dorsi of backcross Iberian x Landrace individuals |
|
