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Status
Public on Aug 30, 2006
Title
Control Group, Line 2, Replicate 1, Female
Sample type
RNA
Source name
Female Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult female flies of the control group of an artificial selection experiment for aggression.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jul 28, 2006
Last update date
Aug 28, 2018
Contact name
Alexis Edwards
E-mail(s)
acedward@ncsu.edu Organization name
North Carolina State University
Department
Genetics
Lab
Trudy Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5404 Expression data from Drosophila subjected to artificial selection on aggression
Relations Reanalyzed by
GSE119084
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE 'P_Value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
13762.9
P
0.0005
1622892_s_at
466.1
P
0.0009
1622893_at
15317.7
P
0.0005
1622894_at
82.7
M
0.0547
1622895_at
797.6
P
0.0012
1622896_at
342.5
P
0.0005
1622897_at
18.5
A
0.5870
1622898_a_at
1005.8
P
0.0005
1622899_at
37.1
A
0.0991
1622900_at
1.7
A
0.6112
1622901_at
194.1
P
0.0110
1622902_at
384.2
P
0.0207
1622903_s_at
743.7
P
0.0005
1622904_at
12.4
A
0.5125
1622905_at
2.4
A
0.9380
1622906_at
985.0
P
0.0009
1622907_at
531.9
P
0.0005
1622908_a_at
238.6
P
0.0046
1622909_at
1629.4
P
0.0005
1622910_at
23.3
A
0.2968
18769 473 Kbytes .Supplementary file Size Download File type/resource GSM123497.CEL.gz
2.1 Mb
(ftp) (http) CEL
