|
Status |
Public on Nov 25, 2014 |
Title |
Peripheral blood from CXMA-04-444 |
Sample type |
genomic |
|
|
Source name |
Peripheral blood
|
Organism |
Homo sapiens |
Characteristics |
smoking (0, 1 and 2, which represent never, former and current smokers): 1 age: 63 gender: Female tissue: blood
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Genomic DNA was extracted from whole blood samples using Qiagen DNeasy Kit according to standard instructions
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina protocol
|
|
|
Hybridization protocol |
Bisulphite converted DNA was hybridised to Illumina Infinium HumanMethylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
CXMA-04-444
|
Data processing |
GenomeStudio (2010.3) Methylation module (1.8.5)
|
|
|
Submission date |
Sep 06, 2013 |
Last update date |
Nov 25, 2014 |
Contact name |
Tsun-Po Yang |
Organization name |
Wellcome Trust Sanger Institute
|
Department |
Human Genetics
|
Lab |
Genetics of Complex Traits in Humans
|
Street address |
Wellcome Trust Genome Campus
|
City |
Cambridge |
ZIP/Postal code |
CB10 1SA |
Country |
United Kingdom |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE50660 |
Cigarette Smoking Reduces DNA Methylation Levels at Multiple Genomic Loci but the Effect is Partially Reversible upon Cessation |
|