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Sample GSM119653 Query DataSets for GSM119653
Status Public on Jul 10, 2006
Title PC control 1
Sample type RNA
 
Source name brain, Posterior Cingulate
Organism Homo sapiens
Characteristics sample amount: 10 ug
bio-source name: PC control 1
organism: Human 
organ/tissue type: brain 
organ region: Posterior Cingulate 
cell type: layer III neurons 
ethnicity: Caucasian 
developmental stage: Adult 
disease state: normal 
sex: male 
genetic variation: None 
age: 85 years
Extracted molecule total RNA
Extraction protocol Arcturus PicoPure
Label protocol Affymetrix double-round expression profiling
 
Hybridization protocol Affymetrix's manufacturer's protocol: hybridization onto Affymetrix Human Genome U133 Plus 2.0 array
Scan protocol Affymetrix GCOS
Description arrayconsortium.tgen.org::biosample.434856
AD control
 
Submission date Jul 10, 2006
Last update date Jun 26, 2019
Contact name Winnie Liang
E-mail(s) wliang@tgen.org
Organization name Translational Genomics
Street address 445 N. Fifth Street
City Phoenix
State/province AZ
ZIP/Postal code 85012
Country USA
 
Platform ID GPL570
Series (1)
GSE5281 Alzheimer's disease and the normal aged brain (steph-affy-human-433773)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087
Reanalyzed by GSE133349

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS 5 or GCOS software.
ABS_CALL The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE The detection p-value calculated by the MAS 5 or GCOS software

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 834.1048 P 0.000110
AFFX-BioB-M_at 1383.8328 P 0.000044
AFFX-BioB-3_at 843.225 P 0.000044
AFFX-BioC-5_at 2513.4812 P 0.000044
AFFX-BioC-3_at 2715.034 P 0.000044
AFFX-BioDn-5_at 6617.8647 P 0.000044
AFFX-BioDn-3_at 10084.576 P 0.000044
AFFX-CreX-5_at 27044.547 P 0.000052
AFFX-CreX-3_at 32659.53 P 0.000044
AFFX-DapX-5_at 1606.3606 P 0.000052
AFFX-DapX-M_at 10358.96 P 0.000044
AFFX-DapX-3_at 28268.229 P 0.000044
AFFX-LysX-5_at 192.6194 P 0.000052
AFFX-LysX-M_at 1473.1686 P 0.000044
AFFX-LysX-3_at 5483.7026 P 0.000044
AFFX-PheX-5_at 690.48425 P 0.000052
AFFX-PheX-M_at 2753.8435 P 0.000044
AFFX-PheX-3_at 4423.479 P 0.000044
AFFX-ThrX-5_at 404.45886 P 0.000044
AFFX-ThrX-M_at 2811.2017 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1679 Kbytes.




Supplementary file Size Download File type/resource
GSM119653.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table
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