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Sample GSM1185597 Query DataSets for GSM1185597
Status Public on Aug 07, 2013
Title 7.18 PROS
Sample type genomic
 
Source name Bone marrow cells
Organism Homo sapiens
Characteristics cell type: Promyelocytes
Extracted molecule genomic DNA
Extraction protocol standard as recommended by illumina
Label Cy5 and Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Normal human bone marrow cells
Data processing Background corrected against out-of-band signals and dye bias corrected against Illumina internal controls
 
Submission date Jul 12, 2013
Last update date Aug 08, 2013
Contact name Peter W. Laird
Organization name USC/Norris Cancer Center
Department USC Epigenome Center
Lab Laird
Street address 1450 Biggy St.
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL13534
Series (1)
GSE49618 Sorted normal bone marrow cells from healthy volunteers at Washington University

Data table header descriptions
ID_REF Illumina ID
VALUE Beta-value
RAW_VALUE raw Beta-value
METHYLATED the methylated probe intensity
UNMETHYLATED the unmethylated probe intensity
Detection_Pval the detection p-value of the probe

Data table
ID_REF VALUE RAW_VALUE METHYLATED UNMETHYLATED Detection_Pval
cg00000029 0.55125 0.61565 5044 3149 0
cg00000108 0.95585 0.94444 13226 778 0
cg00000109 0.90845 0.89622 5760 667 0
cg00000165 0.19215 0.30798 1567 3521 0
cg00000236 0.7606 0.7679 6157 1861 0
cg00000289 0.6736 0.6956 1803 789 0
cg00000292 0.86148 0.86204 11960 1914 0
cg00000321 0.24434 0.34081 3159 6110 0
cg00000363 0.31188 0.40386 6438 9503 0
cg00000622 0.018565 0.01758 241 13468 0
cg00000658 0.86994 0.86248 10342 1649 0
cg00000714 0.14667 0.21585 4781 17369 0
cg00000721 0.93001 0.91804 7583 677 0
cg00000734 0.068464 0.13193 1742 11462 0
cg00000769 0.046651 0.076953 1172 14058 0
cg00000807 0.84697 0.86488 18217 2846 0
cg00000884 0.92259 0.92215 5840 493 0
cg00000905 0.051921 0.11336 727 5686 0
cg00000924 0.46499 0.55349 10658 8598 0
cg00000948 0.91289 0.90162 13564 1480 0

Total number of rows: 485577

Table truncated, full table size 18731 Kbytes.




Supplementary file Size Download File type/resource
GSM1185597_7796806148_R04C01_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM1185597_7796806148_R04C01_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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