NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1185595 Query DataSets for GSM1185595
Status Public on Aug 07, 2013
Title 7.11 MONO
Sample type genomic
 
Source name Bone marrow cells
Organism Homo sapiens
Characteristics cell type: Monocytes
Extracted molecule genomic DNA
Extraction protocol standard as recommended by illumina
Label Cy5 and Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Normal human bone marrow cells
Data processing Background corrected against out-of-band signals and dye bias corrected against Illumina internal controls
 
Submission date Jul 12, 2013
Last update date Aug 08, 2013
Contact name Peter W. Laird
Organization name USC/Norris Cancer Center
Department USC Epigenome Center
Lab Laird
Street address 1450 Biggy St.
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL13534
Series (1)
GSE49618 Sorted normal bone marrow cells from healthy volunteers at Washington University

Data table header descriptions
ID_REF Illumina ID
VALUE Beta-value
RAW_VALUE raw Beta-value
METHYLATED the methylated probe intensity
UNMETHYLATED the unmethylated probe intensity
Detection_Pval the detection p-value of the probe

Data table
ID_REF VALUE RAW_VALUE METHYLATED UNMETHYLATED Detection_Pval
cg00000029 0.46316 0.49514 3207 3270 0
cg00000108 0.94802 0.92518 8495 687 0
cg00000109 0.89862 0.87318 3890 565 0
cg00000165 0.177 0.25583 976 2839 0
cg00000236 0.59436 0.59548 3349 2275 0
cg00000289 0.52619 0.53778 968 832 0
cg00000292 0.85604 0.82973 8606 1766 0
cg00000321 0.37446 0.42128 3864 5308 0
cg00000363 0.44307 0.48715 6256 6586 0
cg00000622 0.017754 0.019056 273 14053 0
cg00000658 0.84303 0.81091 7063 1647 0
cg00000714 0.15595 0.1969 4009 16352 0
cg00000721 0.91906 0.89439 4954 585 0
cg00000734 0.049379 0.091067 994 9921 0
cg00000769 0.044392 0.07398 818 10239 0
cg00000807 0.85379 0.84248 12376 2314 0
cg00000884 0.88987 0.85721 3812 635 0
cg00000905 0.052796 0.095388 486 4609 0
cg00000924 0.44406 0.48961 7560 7881 0
cg00000948 0.90247 0.86855 8973 1358 0

Total number of rows: 485577

Table truncated, full table size 18595 Kbytes.




Supplementary file Size Download File type/resource
GSM1185595_7796806148_R02C01_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM1185595_7796806148_R02C01_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap