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Sample GSM1185592 Query DataSets for GSM1185592
Status Public on Aug 07, 2013
Title 9.1 CD19
Sample type genomic
 
Source name Bone marrow cells
Organism Homo sapiens
Characteristics cell type: CD19+ B cells
Extracted molecule genomic DNA
Extraction protocol standard as recommended by illumina
Label Cy5 and Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Normal human bone marrow cells
Data processing Background corrected against out-of-band signals and dye bias corrected against Illumina internal controls
 
Submission date Jul 12, 2013
Last update date Aug 08, 2013
Contact name Peter W. Laird
Organization name USC/Norris Cancer Center
Department USC Epigenome Center
Lab Laird
Street address 1450 Biggy St.
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL13534
Series (1)
GSE49618 Sorted normal bone marrow cells from healthy volunteers at Washington University

Data table header descriptions
ID_REF Illumina ID
VALUE Beta-value
RAW_VALUE raw Beta-value
METHYLATED the methylated probe intensity
UNMETHYLATED the unmethylated probe intensity
Detection_Pval the detection p-value of the probe

Data table
ID_REF VALUE RAW_VALUE METHYLATED UNMETHYLATED Detection_Pval
cg00000029 0.70901 0.73206 2847 1042 0
cg00000108 0.95646 0.94543 12648 730 0
cg00000109 0.91724 0.89997 5425 603 0
cg00000165 0.16463 0.31963 1260 2682 0
cg00000236 0.90276 0.88466 5093 664 0
cg00000289 0.6884 0.73814 1322 469 0
cg00000292 0.91543 0.9044 8297 877 0
cg00000321 0.29247 0.41985 4036 5577 0
cg00000363 0.45294 0.57524 8777 6481 0
cg00000622 0.012129 0.015984 199 12251 0
cg00000658 0.93511 0.91968 7591 663 0
cg00000714 0.26329 0.37966 8124 13274 0
cg00000721 0.94601 0.93386 6961 493 0
cg00000734 0.048563 0.12252 1273 9117 0
cg00000769 0.020058 0.0449 541 11508 0
cg00000807 0.87433 0.89864 16757 1890 0
cg00000884 0.93476 0.92032 6110 529 0
cg00000905 0.049471 0.14999 838 4749 0
cg00000924 0.44262 0.56578 8850 6792 0
cg00000948 0.9221 0.91899 11991 1057 0

Total number of rows: 485577

Table truncated, full table size 18583 Kbytes.




Supplementary file Size Download File type/resource
GSM1185592_6285625091_R05C02_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM1185592_6285625091_R05C02_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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