|
| Status |
Public on May 30, 2014 |
| Title |
case poor response 133 |
| Sample type |
genomic |
| |
|
| Source name |
PBMC
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Male
vaccine response: poor
tissue: blood
sample type: case
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was purified using the Dneasy Blood and Tissue kit followed by bisufite conversion using the ES DNA methylation kit following manufacturer's protocols.
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Illumina HumanMethylation450 BeadChip Protocol
|
| |
|
| Hybridization protocol |
Illumina HumanMethylation450 BeadChip Protocol
|
| Scan protocol |
Arrays were imaged using Illumina iScan on a two-color channel
|
| Data processing |
background corrected and normalized average beta; the normalization was done by GenomeStudio using control normalization
AVG.BETA: methylaiton level signal intensities; Detection.Pval: detection p-value
|
| |
|
| Submission date |
Jun 26, 2013 |
| Last update date |
May 30, 2014 |
| Contact name |
Weili Yan |
| E-mail(s) |
yanwl@fudan.edu.cn
|
| Organization name |
Department of Clinical Epidemiology, Children's Hospital of Fudan University
|
| Street address |
399 Wanyuan Road
|
| City |
Shanghai |
| ZIP/Postal code |
201102 |
| Country |
China |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE48300 |
Human DNA methylation profiles for the HBV vaccine responses study |
|
