|
Status |
Public on Apr 20, 2015 |
Title |
Twin14_1_G |
Sample type |
genomic |
|
|
Source name |
whole blood 13
|
Organism |
Homo sapiens |
Characteristics |
gender: Male sample type: whole blood disease state: LowBMI_LowLF twin pair: Pair14_Twin1
|
Extracted molecule |
genomic DNA |
Extraction protocol |
High molecular weight DNA was extracted from whole blood using QIAamp DNA Mini kit (QIAGEN) following the QIAamp Spin Procedure.
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
bisulphite converted DNA from whole blood Pair14_Twin1
|
Data processing |
Idat files processed using minfi package in R. Unmethylated and methylated signal intensities
|
|
|
Submission date |
Jan 31, 2013 |
Last update date |
Apr 20, 2015 |
Contact name |
Khadeeja Ismail |
Organization name |
University of Helsinki
|
Department |
Department of Public Health
|
Street address |
Mannerheimintie 172
|
City |
Helsinki |
State/province |
Helsinki |
ZIP/Postal code |
FI-00014 |
Country |
Finland |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE43975 |
Epigenome-wide analysis of monozygotic twin pairs discordant for body mass index |
|