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GEO accession:
Sample GSM1014242
Query DataSets for GSM1014242
Status
Public on Apr 22, 2013
Title
HCC1143 21976
Sample type
RNA
Source name
Breast cancer cell line
Organism
Homo sapiens
Characteristics
cell line: HCC1143
Growth protocol
Cell lines were grown according to standard conditions.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted with RNABee (Campro, Veenendaal, the Netherlands) according to the manufacturer procedure
Label
biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol
Scan protocol
Standard Affymetrix protocol
Data processing
The data were using Affymetrix software Expression Console with default analysis settings and RMA as normalization method.
Submission date
Oct 03, 2012
Last update date
Apr 22, 2013
Contact name
Marcel Smid
Organization name
Erasmus MC
Department
Medical Oncology
Street address
Dr. Molewaterplein 50
City
Rotterdam
ZIP/Postal code
PO Box 2040, 3000CA
Country
Netherlands
Platform ID
GPL13158
Series (1)
GSE41313
Expression data from breast cancer cell lines
Data table header descriptions
ID_REF
VALUE
log2 RMA signal
Data table
ID_REF
VALUE
1007_PM_s_at
10.93782
1053_PM_at
7.43872
117_PM_at
2.899774
121_PM_at
3.988196
1255_PM_g_at
2.50912
1294_PM_at
5.258498
1316_PM_at
3.669026
1320_PM_at
3.482367
1405_PM_i_at
3.401303
1431_PM_at
2.987431
1438_PM_at
4.356036
1487_PM_at
6.86334
1494_PM_f_at
3.082973
1552256_PM_a_at
7.702474
1552257_PM_a_at
8.7889
1552258_PM_at
3.571935
1552261_PM_at
2.60929
1552263_PM_at
6.583416
1552264_PM_a_at
7.545066
1552266_PM_at
2.573213
Total number of rows:
54715
Table truncated, full table size
1213 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1014242_21976.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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