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GEO accession:
Sample GSM1014233
Query DataSets for GSM1014233
Status
Public on Apr 22, 2013
Title
CAMA-1 21840
Sample type
RNA
Source name
Breast cancer cell line
Organism
Homo sapiens
Characteristics
cell line: CAMA-1
Growth protocol
Cell lines were grown according to standard conditions.
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted with RNABee (Campro, Veenendaal, the Netherlands) according to the manufacturer procedure
Label
biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol
Scan protocol
Standard Affymetrix protocol
Data processing
The data were using Affymetrix software Expression Console with default analysis settings and RMA as normalization method.
Submission date
Oct 03, 2012
Last update date
Apr 22, 2013
Contact name
Marcel Smid
Organization name
Erasmus MC
Department
Medical Oncology
Street address
Dr. Molewaterplein 50
City
Rotterdam
ZIP/Postal code
PO Box 2040, 3000CA
Country
Netherlands
Platform ID
GPL13158
Series (1)
GSE41313
Expression data from breast cancer cell lines
Data table header descriptions
ID_REF
VALUE
log2 RMA signal
Data table
ID_REF
VALUE
1007_PM_s_at
10.12637
1053_PM_at
8.399182
117_PM_at
3.103275
121_PM_at
3.994374
1255_PM_g_at
2.339257
1294_PM_at
3.009967
1316_PM_at
5.593154
1320_PM_at
2.862594
1405_PM_i_at
2.438606
1431_PM_at
2.868712
1438_PM_at
5.358345
1487_PM_at
6.410412
1494_PM_f_at
3.465301
1552256_PM_a_at
6.984233
1552257_PM_a_at
8.484259
1552258_PM_at
3.550279
1552261_PM_at
2.706178
1552263_PM_at
6.741728
1552264_PM_a_at
7.290007
1552266_PM_at
3.559844
Total number of rows:
54715
Table truncated, full table size
1213 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1014233_21840.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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