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Series GSE99071 Query DataSets for GSE99071
Status Public on May 19, 2017
Title Whole genome expression data from female adult Drosophila melanogaster midguts
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary The highly conserved Wnt signaling pathway drives intestinal homeostasis across species. Apc is a negative regulator of Wnt signaling. Loss of function mutations in Apc are found in 80-90% of human colorectal cancers. Importantly, Apc loss is widely known as the key driving event in the disease.
We used microarray analysis of adult Drosophila midguts to study the molecular mechanisms regulated upon loss of Apc in the intestine.
 
Overall design Whole midguts from 7 day olfd adult female animals where dissected for RNA isolation and Affymetrix microarray hybridization. Tissues from a wild type strain (w1118) and whole null mutant Apc1 (Apc1Q8, also refered to as Apc1-/-) animals were used in the study.
 
Contributor(s) Cordero JB, Kalna G, Sansom OJ
Citation(s) 28708826
Submission date May 18, 2017
Last update date Jul 25, 2021
Contact name Julia Cordero
E-mail(s) julicordero@gmail.com
Phone 0044-141-330-7256
Organization name University of Glasgow
Street address Garscube Estate. Switchback Road
City Glasgow
ZIP/Postal code G61 1QH
Country United Kingdom
 
Platforms (1)
GPL1322 [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array
Samples (6)
GSM2631848 wild type midguts- sample 1
GSM2631849 wild type midguts- sample 2
GSM2631850 wild type midguts- sample 3
Relations
BioProject PRJNA387176

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99071_RAW.tar 9.5 Mb (http)(custom) TAR (of CEL)
GSE99071_complete_data_matrix.txt.gz 2.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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