NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE97125 Query DataSets for GSE97125
Status Public on Jun 01, 2018
Title Proteolytic processing of LRP2 on RPE cells regulates BMP activity to control eye size and refractive error
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary We compare dissected ocular tissues from wild-type and lrp2-/- mutant adult zebrafish in order to examine the genetic pathways underlying the enlarged eye phenotype observed in the absence of Lrp2. ABSTRACT: Mutations in LRP2, a transmembrane receptor, cause ocular enlargement and high-myopia. LRP2 is expressed by the RPE and eye ciliary epithelia, binding many extracellular ligands, including Bmp4 and Shh. Signaling mediated by LRP2 is very context-dependent, and how multiple pathways are coordinated is unknown. Transcriptome analyses of ocular tissues revealed that controlled, sustained BMP signaling from the RPE is critical for normal eye growth and emmetropia (proper refraction). Using human iPSC-derived RPE, and zebrafish, we demonstrate that BACE sheddase-dependent LRP2 cleavage produces a soluble domain that binds BMP4, inhibiting its signaling. We propose that controlled proteolytic cleavage of LRP2 makes two ligand-binding receptor forms available: a soluble BMP trap, and a membrane-bound RPE signaling facilitator. By modulating LRP2 cleavage, cells can fine-tune and coordinate multiple signaling pathways. This data supports the concept that LRP2 acts as a homeostasis node that buffers and integrates diverse signaling to regulate emmetropic eye growth.
 
Overall design Examination of whole eyes, sclera/choroid, RPE and retina in wild-type and lrp2-/- mutant zebrafish at 1 month post-fertilization.
 
Contributor(s) Collery RF, Link BA
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 28, 2017
Last update date May 15, 2019
Contact name Ross F Collery
E-mail(s) rcollery@mcw.edu
Organization name Medical College of Wisconsin
Street address 8701 Watertown Plank Road
City Milwaukee
State/province Wisconsin
ZIP/Postal code 53226
Country USA
 
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (36)
GSM2551989 ZDR 1 mpf eyes 1
GSM2551990 ZDR 1 mpf eyes 2
GSM2551991 ZDR 1 mpf eyes 3
Relations
BioProject PRJNA380770
SRA SRP102601

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97125_ZDR_wt_vs_lrp2_expression.xlsx 29.6 Mb (ftp)(http) XLSX
GSE97125_no_bmp_vs_bmp_expression.xlsx 9.5 Mb (ftp)(http) XLSX
GSE97125_no_shh_vs_shh_expression.xlsx 9.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap