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| Status |
Public on Dec 25, 2017 |
| Title |
Regulation of Angiotensin II Actions by Enhancers and Super-enhancers in Vascular Smooth Muscle Cells |
| Organism |
Rattus norvegicus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We have profiled Ang II regulated enhancer and super-enhancers in Rat Vascular smooth muscle cells using genomewide analysis of enhancer marks H3K27ac, H3K4me1 and super-enhancer mark BRD4.
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| |
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| Overall design |
Examined two enhancer mark H3K4me1 and H3k27ac and superenhancer mark BRD4 in Rat Vascular smooth muscle cells with or without Ang II
Please note that the sample processing especially data processing is different between the two datasets (H3K4me1/H3k27ac vs. BRD4).
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| |
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| Contributor(s) |
Natarajan R, Das S, Chen Z, Senapati P |
| Citation(s) |
29133788, 34685676 |
| Submission date |
Feb 19, 2017 |
| Last update date |
Oct 27, 2021 |
| Contact name |
Nancy Chen |
| E-mail(s) |
zhuchen@coh.org
|
| Organization name |
City of Hope
|
| Department |
Diabetes
|
| Street address |
1500 Duarte Road
|
| City |
Duarte |
| State/province |
CA |
| ZIP/Postal code |
91010 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL18694 |
Illumina HiSeq 2500 (Rattus norvegicus) |
|
| Samples (14)
|
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| Relations |
| BioProject |
PRJNA375926 |
| SRA |
SRP100316 |
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