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Series GSE85942 Query DataSets for GSE85942
Status Public on Aug 23, 2017
Title Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 29180699
Submission date Aug 23, 2016
Last update date Jul 09, 2019
Contact name Vladimir Makarov
E-mail(s) makarov@ccf.org
Organization name Cleveland Clinic
Department LRI
Lab CITI
Street address 9500 Euclid Ave
City Cleveland
State/province OH
ZIP/Postal code 44195
Country USA
 
Platforms (3)
GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (211)
GSM2288076 Mutant no dox [SV4_M1minus]
GSM2288077 Mutant with dox [SV5_M1plus]
GSM2288078 Mutant dox off [SV6_M1off]
This SuperSeries is composed of the following SubSeries:
GSE85938 Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence [methylation]
GSE85939 Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence [expression microarray]
GSE85940 Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence [ChIP-seq]
Relations
BioProject PRJNA339790

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85942_RAW.tar 515.9 Mb (http)(custom) TAR (of BEDGRAPH, CEL, IDAT)
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